Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4340 |
| Number of amino acids: | 217 |
| Molecular Weight: | 23638.33 Da |
| Theoretical pI: | 6.21 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 8 | 3.69% |
| Cysteine CYS (C) | 5 | 2.3% |
| Glutamic Acid GLU (E) | 14 | 6.45% |
| Aspartic Acid ASP (D) | 9 | 4.15% |
| Glycine GLY (G) | 24 | 11.06% |
| Phynylalanine PHE (F) | 15 | 6.91% |
| Isoleucine ILE (I) | 16 | 7.37% |
| Histidine HIS (H) | 2 | 0.92% |
| Lysine LYS (K) | 14 | 6.45% |
| Methionine MET (M) | 1 | 0.46% |
| Leucine LEU (L) | 20 | 9.22% |
| Asparagine ASN (N) | 9 | 4.15% |
| Glutamine GLN (Q) | 6 | 2.76% |
| Proline PRO (P) | 16 | 7.37% |
| Serine SER (S) | 12 | 5.53% |
| Arginine ARG (R) | 8 | 3.69% |
| Threonine THR (T) | 12 | 5.53% |
| Tryptophan TRP (W) | 1 | 0.46% |
| Valine VAL (V) | 20 | 9.22% |
| Tyrosine TYR (Y) | 5 | 2.3% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1079 |
| Hydrogen | H | 1693 |
| Nitrogen | N | 275 |
| Oxygen | O | 308 |
| Sulphur | S | 6 |
| Formula | C1079H1693N275O308S6 |
| Total Number of Atoms: | 3361 |
| Total number of positively charged residues (ARG + LYS): | 22 |
| Total number of negatively charged residues (ASP + GLU): | 23 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 13200 Absorption 0.1% (=1 g/l) 0.558, assuming all pairs of CYS residues form cystines Ext. coefficient 12950 Absorption 0.1% (=1 g/l) 0.548, assuming all CYS residues are reduced |
| Aromaticity: | 0.097 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 37.49 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [35.48, 28.11, 19.82] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 95.1152 |
| Grand average of hydropathicity (GRAVY): | 0.06 |