Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4339 |
| Number of amino acids: | 217 |
| Molecular Weight: | 23792.37 Da |
| Theoretical pI: | 5.29 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 8 | 3.69% |
| Cysteine CYS (C) | 5 | 2.3% |
| Glutamic Acid GLU (E) | 14 | 6.45% |
| Aspartic Acid ASP (D) | 10 | 4.61% |
| Glycine GLY (G) | 22 | 10.14% |
| Phynylalanine PHE (F) | 18 | 8.29% |
| Isoleucine ILE (I) | 15 | 6.91% |
| Histidine HIS (H) | 2 | 0.92% |
| Lysine LYS (K) | 13 | 5.99% |
| Methionine MET (M) | 1 | 0.46% |
| Leucine LEU (L) | 19 | 8.76% |
| Asparagine ASN (N) | 11 | 5.07% |
| Glutamine GLN (Q) | 8 | 3.69% |
| Proline PRO (P) | 15 | 6.91% |
| Serine SER (S) | 12 | 5.53% |
| Arginine ARG (R) | 7 | 3.23% |
| Threonine THR (T) | 11 | 5.07% |
| Tryptophan TRP (W) | 1 | 0.46% |
| Valine VAL (V) | 21 | 9.68% |
| Tyrosine TYR (Y) | 4 | 1.84% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1087 |
| Hydrogen | H | 1687 |
| Nitrogen | N | 275 |
| Oxygen | O | 312 |
| Sulphur | S | 6 |
| Formula | C1087H1687N275O312S6 |
| Total Number of Atoms: | 3367 |
| Total number of positively charged residues (ARG + LYS): | 20 |
| Total number of negatively charged residues (ASP + GLU): | 24 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 11710 Absorption 0.1% (=1 g/l) 0.492, assuming all pairs of CYS residues form cystines Ext. coefficient 11460 Absorption 0.1% (=1 g/l) 0.482, assuming all CYS residues are reduced |
| Aromaticity: | 0.106 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 37.93 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [35.94, 27.65, 19.35] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 92.8571 |
| Grand average of hydropathicity (GRAVY): | 0.05 |