Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4338 |
| Number of amino acids: | 326 |
| Molecular Weight: | 35716.74 Da |
| Theoretical pI: | 6.15 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 30 | 9.2% |
| Cysteine CYS (C) | 8 | 2.45% |
| Glutamic Acid GLU (E) | 23 | 7.06% |
| Aspartic Acid ASP (D) | 17 | 5.21% |
| Glycine GLY (G) | 23 | 7.06% |
| Phynylalanine PHE (F) | 15 | 4.6% |
| Isoleucine ILE (I) | 21 | 6.44% |
| Histidine HIS (H) | 11 | 3.37% |
| Lysine LYS (K) | 17 | 5.21% |
| Methionine MET (M) | 5 | 1.53% |
| Leucine LEU (L) | 26 | 7.98% |
| Asparagine ASN (N) | 10 | 3.07% |
| Glutamine GLN (Q) | 8 | 2.45% |
| Proline PRO (P) | 16 | 4.91% |
| Serine SER (S) | 29 | 8.9% |
| Arginine ARG (R) | 18 | 5.52% |
| Threonine THR (T) | 14 | 4.29% |
| Tryptophan TRP (W) | 5 | 1.53% |
| Valine VAL (V) | 26 | 7.98% |
| Tyrosine TYR (Y) | 4 | 1.23% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1585 |
| Hydrogen | H | 2500 |
| Nitrogen | N | 442 |
| Oxygen | O | 472 |
| Sulphur | S | 13 |
| Formula | C1585H2500N442O472S13 |
| Total Number of Atoms: | 5012 |
| Total number of positively charged residues (ARG + LYS): | 35 |
| Total number of negatively charged residues (ASP + GLU): | 40 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 33960 Absorption 0.1% (=1 g/l) 0.951, assuming all pairs of CYS residues form cystines Ext. coefficient 33460 Absorption 0.1% (=1 g/l) 0.937, assuming all CYS residues are reduced |
| Aromaticity: | 0.074 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 38.72 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [29.75, 23.93, 25.77] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 88.5583 |
| Grand average of hydropathicity (GRAVY): | -0.11 |