Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4328 |
| Number of amino acids: | 421 |
| Molecular Weight: | 48416.3 Da |
| Theoretical pI: | 4.4 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 23 | 5.46% |
| Cysteine CYS (C) | 3 | 0.71% |
| Glutamic Acid GLU (E) | 52 | 12.35% |
| Aspartic Acid ASP (D) | 47 | 11.16% |
| Glycine GLY (G) | 22 | 5.23% |
| Phynylalanine PHE (F) | 16 | 3.8% |
| Isoleucine ILE (I) | 23 | 5.46% |
| Histidine HIS (H) | 4 | 0.95% |
| Lysine LYS (K) | 48 | 11.4% |
| Methionine MET (M) | 2 | 0.48% |
| Leucine LEU (L) | 30 | 7.13% |
| Asparagine ASN (N) | 19 | 4.51% |
| Glutamine GLN (Q) | 11 | 2.61% |
| Proline PRO (P) | 28 | 6.65% |
| Serine SER (S) | 25 | 5.94% |
| Arginine ARG (R) | 5 | 1.19% |
| Threonine THR (T) | 20 | 4.75% |
| Tryptophan TRP (W) | 13 | 3.09% |
| Valine VAL (V) | 13 | 3.09% |
| Tyrosine TYR (Y) | 17 | 4.04% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 2171 |
| Hydrogen | H | 3269 |
| Nitrogen | N | 535 |
| Oxygen | O | 712 |
| Sulphur | S | 5 |
| Formula | C2171H3269N535O712S5 |
| Total Number of Atoms: | 6692 |
| Total number of positively charged residues (ARG + LYS): | 53 |
| Total number of negatively charged residues (ASP + GLU): | 99 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 96955 Absorption 0.1% (=1 g/l) 2.003, assuming all pairs of CYS residues form cystines Ext. coefficient 96830 Absorption 0.1% (=1 g/l) 2.000, assuming all CYS residues are reduced |
| Aromaticity: | 0.109 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 35.08 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [26.60, 22.33, 25.42] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 63.5154 |
| Grand average of hydropathicity (GRAVY): | -1.01 |