Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4322 |
| Number of amino acids: | 509 |
| Molecular Weight: | 54073.67 Da |
| Theoretical pI: | 5.2 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 43 | 8.45% |
| Cysteine CYS (C) | 12 | 2.36% |
| Glutamic Acid GLU (E) | 29 | 5.7% |
| Aspartic Acid ASP (D) | 22 | 4.32% |
| Glycine GLY (G) | 64 | 12.57% |
| Phynylalanine PHE (F) | 25 | 4.91% |
| Isoleucine ILE (I) | 29 | 5.7% |
| Histidine HIS (H) | 6 | 1.18% |
| Lysine LYS (K) | 28 | 5.5% |
| Methionine MET (M) | 14 | 2.75% |
| Leucine LEU (L) | 39 | 7.66% |
| Asparagine ASN (N) | 15 | 2.95% |
| Glutamine GLN (Q) | 24 | 4.72% |
| Proline PRO (P) | 22 | 4.32% |
| Serine SER (S) | 42 | 8.25% |
| Arginine ARG (R) | 12 | 2.36% |
| Threonine THR (T) | 23 | 4.52% |
| Tryptophan TRP (W) | 6 | 1.18% |
| Valine VAL (V) | 39 | 7.66% |
| Tyrosine TYR (Y) | 15 | 2.95% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 2409 |
| Hydrogen | H | 3756 |
| Nitrogen | N | 630 |
| Oxygen | O | 731 |
| Sulphur | S | 26 |
| Formula | C2409H3756N630O731S26 |
| Total Number of Atoms: | 7552 |
| Total number of positively charged residues (ARG + LYS): | 40 |
| Total number of negatively charged residues (ASP + GLU): | 51 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 56100 Absorption 0.1% (=1 g/l) 1.037, assuming all pairs of CYS residues form cystines Ext. coefficient 55350 Absorption 0.1% (=1 g/l) 1.024, assuming all CYS residues are reduced |
| Aromaticity: | 0.090 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 38.00 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [30.06, 28.09, 24.56] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 82.7701 |
| Grand average of hydropathicity (GRAVY): | 0.03 |