Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4315 |
| Number of amino acids: | 397 |
| Molecular Weight: | 44082.09 Da |
| Theoretical pI: | 6 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 24 | 6.05% |
| Cysteine CYS (C) | 12 | 3.02% |
| Glutamic Acid GLU (E) | 14 | 3.53% |
| Aspartic Acid ASP (D) | 29 | 7.3% |
| Glycine GLY (G) | 37 | 9.32% |
| Phynylalanine PHE (F) | 15 | 3.78% |
| Isoleucine ILE (I) | 28 | 7.05% |
| Histidine HIS (H) | 13 | 3.27% |
| Lysine LYS (K) | 18 | 4.53% |
| Methionine MET (M) | 12 | 3.02% |
| Leucine LEU (L) | 26 | 6.55% |
| Asparagine ASN (N) | 23 | 5.79% |
| Glutamine GLN (Q) | 18 | 4.53% |
| Proline PRO (P) | 17 | 4.28% |
| Serine SER (S) | 19 | 4.79% |
| Arginine ARG (R) | 18 | 4.53% |
| Threonine THR (T) | 26 | 6.55% |
| Tryptophan TRP (W) | 10 | 2.52% |
| Valine VAL (V) | 29 | 7.3% |
| Tyrosine TYR (Y) | 9 | 2.27% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1945 |
| Hydrogen | H | 3016 |
| Nitrogen | N | 546 |
| Oxygen | O | 579 |
| Sulphur | S | 24 |
| Formula | C1945H3016N546O579S24 |
| Total Number of Atoms: | 6110 |
| Total number of positively charged residues (ARG + LYS): | 36 |
| Total number of negatively charged residues (ASP + GLU): | 43 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 69160 Absorption 0.1% (=1 g/l) 1.569, assuming all pairs of CYS residues form cystines Ext. coefficient 68410 Absorption 0.1% (=1 g/l) 1.552, assuming all CYS residues are reduced |
| Aromaticity: | 0.086 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 36.01 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [29.47, 24.18, 19.14] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 80.2771 |
| Grand average of hydropathicity (GRAVY): | -0.25 |