Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4312 |
| Number of amino acids: | 317 |
| Molecular Weight: | 34705.72 Da |
| Theoretical pI: | 9.06 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 29 | 9.15% |
| Cysteine CYS (C) | 8 | 2.52% |
| Glutamic Acid GLU (E) | 11 | 3.47% |
| Aspartic Acid ASP (D) | 17 | 5.36% |
| Glycine GLY (G) | 20 | 6.31% |
| Phynylalanine PHE (F) | 15 | 4.73% |
| Isoleucine ILE (I) | 14 | 4.42% |
| Histidine HIS (H) | 12 | 3.79% |
| Lysine LYS (K) | 21 | 6.62% |
| Methionine MET (M) | 9 | 2.84% |
| Leucine LEU (L) | 28 | 8.83% |
| Asparagine ASN (N) | 21 | 6.62% |
| Glutamine GLN (Q) | 11 | 3.47% |
| Proline PRO (P) | 14 | 4.42% |
| Serine SER (S) | 28 | 8.83% |
| Arginine ARG (R) | 15 | 4.73% |
| Threonine THR (T) | 13 | 4.1% |
| Tryptophan TRP (W) | 1 | 0.32% |
| Valine VAL (V) | 24 | 7.57% |
| Tyrosine TYR (Y) | 6 | 1.89% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1524 |
| Hydrogen | H | 2426 |
| Nitrogen | N | 440 |
| Oxygen | O | 453 |
| Sulphur | S | 17 |
| Formula | C1524H2426N440O453S17 |
| Total Number of Atoms: | 4860 |
| Total number of positively charged residues (ARG + LYS): | 36 |
| Total number of negatively charged residues (ASP + GLU): | 28 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 14940 Absorption 0.1% (=1 g/l) 0.430, assuming all pairs of CYS residues form cystines Ext. coefficient 14440 Absorption 0.1% (=1 g/l) 0.416, assuming all CYS residues are reduced |
| Aromaticity: | 0.069 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 46.68 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [27.76, 26.18, 24.29] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 82.776 |
| Grand average of hydropathicity (GRAVY): | -0.21 |