Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4310 |
| Number of amino acids: | 358 |
| Molecular Weight: | 39559.43 Da |
| Theoretical pI: | 8.59 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 30 | 8.38% |
| Cysteine CYS (C) | 8 | 2.23% |
| Glutamic Acid GLU (E) | 12 | 3.35% |
| Aspartic Acid ASP (D) | 20 | 5.59% |
| Glycine GLY (G) | 19 | 5.31% |
| Phynylalanine PHE (F) | 22 | 6.15% |
| Isoleucine ILE (I) | 23 | 6.42% |
| Histidine HIS (H) | 4 | 1.12% |
| Lysine LYS (K) | 16 | 4.47% |
| Methionine MET (M) | 9 | 2.51% |
| Leucine LEU (L) | 35 | 9.78% |
| Asparagine ASN (N) | 22 | 6.15% |
| Glutamine GLN (Q) | 19 | 5.31% |
| Proline PRO (P) | 15 | 4.19% |
| Serine SER (S) | 30 | 8.38% |
| Arginine ARG (R) | 20 | 5.59% |
| Threonine THR (T) | 21 | 5.87% |
| Tryptophan TRP (W) | 1 | 0.28% |
| Valine VAL (V) | 25 | 6.98% |
| Tyrosine TYR (Y) | 7 | 1.96% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1754 |
| Hydrogen | H | 2794 |
| Nitrogen | N | 484 |
| Oxygen | O | 522 |
| Sulphur | S | 17 |
| Formula | C1754H2794N484O522S17 |
| Total Number of Atoms: | 5571 |
| Total number of positively charged residues (ARG + LYS): | 36 |
| Total number of negatively charged residues (ASP + GLU): | 32 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 16430 Absorption 0.1% (=1 g/l) 0.415, assuming all pairs of CYS residues form cystines Ext. coefficient 15930 Absorption 0.1% (=1 g/l) 0.403, assuming all CYS residues are reduced |
| Aromaticity: | 0.084 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 47.28 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [31.56, 24.02, 24.02] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 91.8157 |
| Grand average of hydropathicity (GRAVY): | -0.02 |