Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4305 |
| Number of amino acids: | 919 |
| Molecular Weight: | 101006.24 Da |
| Theoretical pI: | 5.67 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 76 | 8.27% |
| Cysteine CYS (C) | 22 | 2.39% |
| Glutamic Acid GLU (E) | 50 | 5.44% |
| Aspartic Acid ASP (D) | 43 | 4.68% |
| Glycine GLY (G) | 94 | 10.23% |
| Phynylalanine PHE (F) | 37 | 4.03% |
| Isoleucine ILE (I) | 46 | 5.01% |
| Histidine HIS (H) | 18 | 1.96% |
| Lysine LYS (K) | 41 | 4.46% |
| Methionine MET (M) | 17 | 1.85% |
| Leucine LEU (L) | 78 | 8.49% |
| Asparagine ASN (N) | 37 | 4.03% |
| Glutamine GLN (Q) | 33 | 3.59% |
| Proline PRO (P) | 48 | 5.22% |
| Serine SER (S) | 72 | 7.83% |
| Arginine ARG (R) | 36 | 3.92% |
| Threonine THR (T) | 50 | 5.44% |
| Tryptophan TRP (W) | 28 | 3.05% |
| Valine VAL (V) | 52 | 5.66% |
| Tyrosine TYR (Y) | 41 | 4.46% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 4542 |
| Hydrogen | H | 6888 |
| Nitrogen | N | 1202 |
| Oxygen | O | 1339 |
| Sulphur | S | 39 |
| Formula | C4542H6888N1202O1339S39 |
| Total Number of Atoms: | 14010 |
| Total number of positively charged residues (ARG + LYS): | 77 |
| Total number of negatively charged residues (ASP + GLU): | 93 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 216465 Absorption 0.1% (=1 g/l) 2.143, assuming all pairs of CYS residues form cystines Ext. coefficient 215090 Absorption 0.1% (=1 g/l) 2.129, assuming all CYS residues are reduced |
| Aromaticity: | 0.115 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 38.20 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [30.69, 27.31, 24.05] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 77.3014 |
| Grand average of hydropathicity (GRAVY): | -0.20 |