Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4303 |
| Number of amino acids: | 730 |
| Molecular Weight: | 81927.88 Da |
| Theoretical pI: | 8.48 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 30 | 4.11% |
| Cysteine CYS (C) | 25 | 3.42% |
| Glutamic Acid GLU (E) | 47 | 6.44% |
| Aspartic Acid ASP (D) | 37 | 5.07% |
| Glycine GLY (G) | 57 | 7.81% |
| Phynylalanine PHE (F) | 32 | 4.38% |
| Isoleucine ILE (I) | 49 | 6.71% |
| Histidine HIS (H) | 9 | 1.23% |
| Lysine LYS (K) | 45 | 6.16% |
| Methionine MET (M) | 19 | 2.6% |
| Leucine LEU (L) | 61 | 8.36% |
| Asparagine ASN (N) | 37 | 5.07% |
| Glutamine GLN (Q) | 14 | 1.92% |
| Proline PRO (P) | 26 | 3.56% |
| Serine SER (S) | 65 | 8.9% |
| Arginine ARG (R) | 48 | 6.58% |
| Threonine THR (T) | 43 | 5.89% |
| Tryptophan TRP (W) | 4 | 0.55% |
| Valine VAL (V) | 50 | 6.85% |
| Tyrosine TYR (Y) | 32 | 4.38% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 3614 |
| Hydrogen | H | 5730 |
| Nitrogen | N | 992 |
| Oxygen | O | 1090 |
| Sulphur | S | 44 |
| Formula | C3614H5730N992O1090S44 |
| Total Number of Atoms: | 11470 |
| Total number of positively charged residues (ARG + LYS): | 93 |
| Total number of negatively charged residues (ASP + GLU): | 84 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 71180 Absorption 0.1% (=1 g/l) 0.869, assuming all pairs of CYS residues form cystines Ext. coefficient 69680 Absorption 0.1% (=1 g/l) 0.851, assuming all CYS residues are reduced |
| Aromaticity: | 0.093 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 47.20 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [31.23, 25.34, 21.51] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 82.7397 |
| Grand average of hydropathicity (GRAVY): | -0.25 |