Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4301 |
| Number of amino acids: | 887 |
| Molecular Weight: | 99198.65 Da |
| Theoretical pI: | 8.3 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 55 | 6.2% |
| Cysteine CYS (C) | 20 | 2.25% |
| Glutamic Acid GLU (E) | 42 | 4.74% |
| Aspartic Acid ASP (D) | 47 | 5.3% |
| Glycine GLY (G) | 80 | 9.02% |
| Phynylalanine PHE (F) | 40 | 4.51% |
| Isoleucine ILE (I) | 48 | 5.41% |
| Histidine HIS (H) | 23 | 2.59% |
| Lysine LYS (K) | 58 | 6.54% |
| Methionine MET (M) | 17 | 1.92% |
| Leucine LEU (L) | 66 | 7.44% |
| Asparagine ASN (N) | 39 | 4.4% |
| Glutamine GLN (Q) | 29 | 3.27% |
| Proline PRO (P) | 43 | 4.85% |
| Serine SER (S) | 76 | 8.57% |
| Arginine ARG (R) | 37 | 4.17% |
| Threonine THR (T) | 44 | 4.96% |
| Tryptophan TRP (W) | 26 | 2.93% |
| Valine VAL (V) | 57 | 6.43% |
| Tyrosine TYR (Y) | 40 | 4.51% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 4471 |
| Hydrogen | H | 6802 |
| Nitrogen | N | 1196 |
| Oxygen | O | 1294 |
| Sulphur | S | 37 |
| Formula | C4471H6802N1196O1294S37 |
| Total Number of Atoms: | 13800 |
| Total number of positively charged residues (ARG + LYS): | 95 |
| Total number of negatively charged residues (ASP + GLU): | 89 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 203850 Absorption 0.1% (=1 g/l) 2.055, assuming all pairs of CYS residues form cystines Ext. coefficient 202600 Absorption 0.1% (=1 g/l) 2.042, assuming all CYS residues are reduced |
| Aromaticity: | 0.120 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 37.01 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [31.23, 26.83, 20.29] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 74.9606 |
| Grand average of hydropathicity (GRAVY): | -0.32 |