Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4297 |
| Number of amino acids: | 1295 |
| Molecular Weight: | 143575.83 Da |
| Theoretical pI: | 7.76 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 105 | 8.11% |
| Cysteine CYS (C) | 20 | 1.54% |
| Glutamic Acid GLU (E) | 68 | 5.25% |
| Aspartic Acid ASP (D) | 60 | 4.63% |
| Glycine GLY (G) | 80 | 6.18% |
| Phynylalanine PHE (F) | 63 | 4.86% |
| Isoleucine ILE (I) | 89 | 6.87% |
| Histidine HIS (H) | 15 | 1.16% |
| Lysine LYS (K) | 70 | 5.41% |
| Methionine MET (M) | 32 | 2.47% |
| Leucine LEU (L) | 159 | 12.28% |
| Asparagine ASN (N) | 47 | 3.63% |
| Glutamine GLN (Q) | 43 | 3.32% |
| Proline PRO (P) | 46 | 3.55% |
| Serine SER (S) | 108 | 8.34% |
| Arginine ARG (R) | 60 | 4.63% |
| Threonine THR (T) | 74 | 5.71% |
| Tryptophan TRP (W) | 22 | 1.7% |
| Valine VAL (V) | 99 | 7.64% |
| Tyrosine TYR (Y) | 35 | 2.7% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 6505 |
| Hydrogen | H | 10323 |
| Nitrogen | N | 1687 |
| Oxygen | O | 1859 |
| Sulphur | S | 52 |
| Formula | C6505H10323N1687O1859S52 |
| Total Number of Atoms: | 20426 |
| Total number of positively charged residues (ARG + LYS): | 130 |
| Total number of negatively charged residues (ASP + GLU): | 128 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 174400 Absorption 0.1% (=1 g/l) 1.215, assuming all pairs of CYS residues form cystines Ext. coefficient 173150 Absorption 0.1% (=1 g/l) 1.206, assuming all CYS residues are reduced |
| Aromaticity: | 0.093 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 36.42 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [36.06, 21.70, 28.11] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 104.965 |
| Grand average of hydropathicity (GRAVY): | 0.18 |