Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4295 |
| Number of amino acids: | 649 |
| Molecular Weight: | 72167.03 Da |
| Theoretical pI: | 5.78 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 41 | 6.32% |
| Cysteine CYS (C) | 5 | 0.77% |
| Glutamic Acid GLU (E) | 31 | 4.78% |
| Aspartic Acid ASP (D) | 42 | 6.47% |
| Glycine GLY (G) | 52 | 8.01% |
| Phynylalanine PHE (F) | 29 | 4.47% |
| Isoleucine ILE (I) | 22 | 3.39% |
| Histidine HIS (H) | 16 | 2.47% |
| Lysine LYS (K) | 35 | 5.39% |
| Methionine MET (M) | 11 | 1.69% |
| Leucine LEU (L) | 56 | 8.63% |
| Asparagine ASN (N) | 28 | 4.31% |
| Glutamine GLN (Q) | 21 | 3.24% |
| Proline PRO (P) | 36 | 5.55% |
| Serine SER (S) | 64 | 9.86% |
| Arginine ARG (R) | 26 | 4.01% |
| Threonine THR (T) | 40 | 6.16% |
| Tryptophan TRP (W) | 19 | 2.93% |
| Valine VAL (V) | 49 | 7.55% |
| Tyrosine TYR (Y) | 26 | 4.01% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 3248 |
| Hydrogen | H | 4930 |
| Nitrogen | N | 862 |
| Oxygen | O | 975 |
| Sulphur | S | 16 |
| Formula | C3248H4930N862O975S16 |
| Total Number of Atoms: | 10031 |
| Total number of positively charged residues (ARG + LYS): | 61 |
| Total number of negatively charged residues (ASP + GLU): | 73 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 143490 Absorption 0.1% (=1 g/l) 1.988, assuming all pairs of CYS residues form cystines Ext. coefficient 143240 Absorption 0.1% (=1 g/l) 1.985, assuming all CYS residues are reduced |
| Aromaticity: | 0.114 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 35.05 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [30.97, 27.73, 21.42] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 75.0848 |
| Grand average of hydropathicity (GRAVY): | -0.36 |