Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4291 |
| Number of amino acids: | 808 |
| Molecular Weight: | 90071.8 Da |
| Theoretical pI: | 5.9 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 57 | 7.05% |
| Cysteine CYS (C) | 22 | 2.72% |
| Glutamic Acid GLU (E) | 46 | 5.69% |
| Aspartic Acid ASP (D) | 38 | 4.7% |
| Glycine GLY (G) | 74 | 9.16% |
| Phynylalanine PHE (F) | 35 | 4.33% |
| Isoleucine ILE (I) | 37 | 4.58% |
| Histidine HIS (H) | 20 | 2.48% |
| Lysine LYS (K) | 38 | 4.7% |
| Methionine MET (M) | 22 | 2.72% |
| Leucine LEU (L) | 53 | 6.56% |
| Asparagine ASN (N) | 50 | 6.19% |
| Glutamine GLN (Q) | 25 | 3.09% |
| Proline PRO (P) | 37 | 4.58% |
| Serine SER (S) | 50 | 6.19% |
| Arginine ARG (R) | 33 | 4.08% |
| Threonine THR (T) | 50 | 6.19% |
| Tryptophan TRP (W) | 20 | 2.48% |
| Valine VAL (V) | 61 | 7.55% |
| Tyrosine TYR (Y) | 40 | 4.95% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 4023 |
| Hydrogen | H | 6094 |
| Nitrogen | N | 1080 |
| Oxygen | O | 1192 |
| Sulphur | S | 44 |
| Formula | C4023H6094N1080O1192S44 |
| Total Number of Atoms: | 12433 |
| Total number of positively charged residues (ARG + LYS): | 71 |
| Total number of negatively charged residues (ASP + GLU): | 84 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 170975 Absorption 0.1% (=1 g/l) 1.898, assuming all pairs of CYS residues form cystines Ext. coefficient 169600 Absorption 0.1% (=1 g/l) 1.883, assuming all CYS residues are reduced |
| Aromaticity: | 0.118 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 37.20 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [30.45, 26.11, 22.03] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 72.3886 |
| Grand average of hydropathicity (GRAVY): | -0.28 |