Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4289 |
| Number of amino acids: | 275 |
| Molecular Weight: | 30252.81 Da |
| Theoretical pI: | 5.22 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 21 | 7.64% |
| Cysteine CYS (C) | 0 | 0% |
| Glutamic Acid GLU (E) | 13 | 4.73% |
| Aspartic Acid ASP (D) | 13 | 4.73% |
| Glycine GLY (G) | 16 | 5.82% |
| Phynylalanine PHE (F) | 21 | 7.64% |
| Isoleucine ILE (I) | 15 | 5.45% |
| Histidine HIS (H) | 5 | 1.82% |
| Lysine LYS (K) | 14 | 5.09% |
| Methionine MET (M) | 2 | 0.73% |
| Leucine LEU (L) | 17 | 6.18% |
| Asparagine ASN (N) | 17 | 6.18% |
| Glutamine GLN (Q) | 9 | 3.27% |
| Proline PRO (P) | 9 | 3.27% |
| Serine SER (S) | 28 | 10.18% |
| Arginine ARG (R) | 5 | 1.82% |
| Threonine THR (T) | 32 | 11.64% |
| Tryptophan TRP (W) | 5 | 1.82% |
| Valine VAL (V) | 24 | 8.73% |
| Tyrosine TYR (Y) | 9 | 3.27% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1373 |
| Hydrogen | H | 2081 |
| Nitrogen | N | 345 |
| Oxygen | O | 423 |
| Sulphur | S | 2 |
| Formula | C1373H2081N345O423S2 |
| Total Number of Atoms: | 4224 |
| Total number of positively charged residues (ARG + LYS): | 19 |
| Total number of negatively charged residues (ASP + GLU): | 26 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 40910 Absorption 0.1% (=1 g/l) 1.352 |
| Aromaticity: | 0.127 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 27.29 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [33.09, 25.45, 19.27] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 78.3273 |
| Grand average of hydropathicity (GRAVY): | -0.09 |