Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4275 |
| Number of amino acids: | 1207 |
| Molecular Weight: | 131957.19 Da |
| Theoretical pI: | 6.5 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 64 | 5.3% |
| Cysteine CYS (C) | 22 | 1.82% |
| Glutamic Acid GLU (E) | 50 | 4.14% |
| Aspartic Acid ASP (D) | 60 | 4.97% |
| Glycine GLY (G) | 93 | 7.71% |
| Phynylalanine PHE (F) | 59 | 4.89% |
| Isoleucine ILE (I) | 65 | 5.39% |
| Histidine HIS (H) | 24 | 1.99% |
| Lysine LYS (K) | 72 | 5.97% |
| Methionine MET (M) | 25 | 2.07% |
| Leucine LEU (L) | 179 | 14.83% |
| Asparagine ASN (N) | 90 | 7.46% |
| Glutamine GLN (Q) | 34 | 2.82% |
| Proline PRO (P) | 55 | 4.56% |
| Serine SER (S) | 137 | 11.35% |
| Arginine ARG (R) | 32 | 2.65% |
| Threonine THR (T) | 48 | 3.98% |
| Tryptophan TRP (W) | 9 | 0.75% |
| Valine VAL (V) | 56 | 4.64% |
| Tyrosine TYR (Y) | 33 | 2.73% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 5906 |
| Hydrogen | H | 9326 |
| Nitrogen | N | 1556 |
| Oxygen | O | 1770 |
| Sulphur | S | 47 |
| Formula | C5906H9326N1556O1770S47 |
| Total Number of Atoms: | 18605 |
| Total number of positively charged residues (ARG + LYS): | 104 |
| Total number of negatively charged residues (ASP + GLU): | 110 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 100045 Absorption 0.1% (=1 g/l) 0.758, assuming all pairs of CYS residues form cystines Ext. coefficient 98670 Absorption 0.1% (=1 g/l) 0.748, assuming all CYS residues are reduced |
| Aromaticity: | 0.084 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 29.76 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [33.22, 31.07, 26.35] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 97.5975 |
| Grand average of hydropathicity (GRAVY): | -0.04 |