Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4273 |
| Number of amino acids: | 417 |
| Molecular Weight: | 45821.24 Da |
| Theoretical pI: | 8.14 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 47 | 11.27% |
| Cysteine CYS (C) | 7 | 1.68% |
| Glutamic Acid GLU (E) | 17 | 4.08% |
| Aspartic Acid ASP (D) | 22 | 5.28% |
| Glycine GLY (G) | 36 | 8.63% |
| Phynylalanine PHE (F) | 10 | 2.4% |
| Isoleucine ILE (I) | 15 | 3.6% |
| Histidine HIS (H) | 7 | 1.68% |
| Lysine LYS (K) | 16 | 3.84% |
| Methionine MET (M) | 12 | 2.88% |
| Leucine LEU (L) | 31 | 7.43% |
| Asparagine ASN (N) | 29 | 6.95% |
| Glutamine GLN (Q) | 17 | 4.08% |
| Proline PRO (P) | 15 | 3.6% |
| Serine SER (S) | 40 | 9.59% |
| Arginine ARG (R) | 25 | 6% |
| Threonine THR (T) | 19 | 4.56% |
| Tryptophan TRP (W) | 16 | 3.84% |
| Valine VAL (V) | 22 | 5.28% |
| Tyrosine TYR (Y) | 14 | 3.36% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 2005 |
| Hydrogen | H | 3086 |
| Nitrogen | N | 584 |
| Oxygen | O | 615 |
| Sulphur | S | 19 |
| Formula | C2005H3086N584O615S19 |
| Total Number of Atoms: | 6309 |
| Total number of positively charged residues (ARG + LYS): | 41 |
| Total number of negatively charged residues (ASP + GLU): | 39 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 109235 Absorption 0.1% (=1 g/l) 2.384, assuming all pairs of CYS residues form cystines Ext. coefficient 108860 Absorption 0.1% (=1 g/l) 2.376, assuming all CYS residues are reduced |
| Aromaticity: | 0.096 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 44.18 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [25.90, 28.78, 25.66] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 69.5923 |
| Grand average of hydropathicity (GRAVY): | -0.43 |