Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4268 |
| Number of amino acids: | 525 |
| Molecular Weight: | 60798.5 Da |
| Theoretical pI: | 6.68 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 35 | 6.67% |
| Cysteine CYS (C) | 12 | 2.29% |
| Glutamic Acid GLU (E) | 55 | 10.48% |
| Aspartic Acid ASP (D) | 11 | 2.1% |
| Glycine GLY (G) | 31 | 5.9% |
| Phynylalanine PHE (F) | 35 | 6.67% |
| Isoleucine ILE (I) | 16 | 3.05% |
| Histidine HIS (H) | 11 | 2.1% |
| Lysine LYS (K) | 26 | 4.95% |
| Methionine MET (M) | 5 | 0.95% |
| Leucine LEU (L) | 28 | 5.33% |
| Asparagine ASN (N) | 31 | 5.9% |
| Glutamine GLN (Q) | 62 | 11.81% |
| Proline PRO (P) | 24 | 4.57% |
| Serine SER (S) | 33 | 6.29% |
| Arginine ARG (R) | 38 | 7.24% |
| Threonine THR (T) | 19 | 3.62% |
| Tryptophan TRP (W) | 1 | 0.19% |
| Valine VAL (V) | 30 | 5.71% |
| Tyrosine TYR (Y) | 22 | 4.19% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 2664 |
| Hydrogen | H | 4085 |
| Nitrogen | N | 781 |
| Oxygen | O | 825 |
| Sulphur | S | 17 |
| Formula | C2664H4085N781O825S17 |
| Total Number of Atoms: | 8372 |
| Total number of positively charged residues (ARG + LYS): | 64 |
| Total number of negatively charged residues (ASP + GLU): | 66 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 39030 Absorption 0.1% (=1 g/l) 0.642, assuming all pairs of CYS residues form cystines Ext. coefficient 38280 Absorption 0.1% (=1 g/l) 0.630, assuming all CYS residues are reduced |
| Aromaticity: | 0.110 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 60.29 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [25.14, 22.67, 23.43] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 55.9238 |
| Grand average of hydropathicity (GRAVY): | -0.91 |