Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4264 |
| Number of amino acids: | 830 |
| Molecular Weight: | 91467.52 Da |
| Theoretical pI: | 5.91 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 39 | 4.7% |
| Cysteine CYS (C) | 10 | 1.2% |
| Glutamic Acid GLU (E) | 39 | 4.7% |
| Aspartic Acid ASP (D) | 46 | 5.54% |
| Glycine GLY (G) | 67 | 8.07% |
| Phynylalanine PHE (F) | 46 | 5.54% |
| Isoleucine ILE (I) | 43 | 5.18% |
| Histidine HIS (H) | 15 | 1.81% |
| Lysine LYS (K) | 43 | 5.18% |
| Methionine MET (M) | 23 | 2.77% |
| Leucine LEU (L) | 72 | 8.67% |
| Asparagine ASN (N) | 50 | 6.02% |
| Glutamine GLN (Q) | 25 | 3.01% |
| Proline PRO (P) | 34 | 4.1% |
| Serine SER (S) | 89 | 10.72% |
| Arginine ARG (R) | 32 | 3.86% |
| Threonine THR (T) | 57 | 6.87% |
| Tryptophan TRP (W) | 8 | 0.96% |
| Valine VAL (V) | 64 | 7.71% |
| Tyrosine TYR (Y) | 28 | 3.37% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 4069 |
| Hydrogen | H | 6332 |
| Nitrogen | N | 1082 |
| Oxygen | O | 1250 |
| Sulphur | S | 33 |
| Formula | C4069H6332N1082O1250S33 |
| Total Number of Atoms: | 12766 |
| Total number of positively charged residues (ARG + LYS): | 75 |
| Total number of negatively charged residues (ASP + GLU): | 85 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 86345 Absorption 0.1% (=1 g/l) 0.944, assuming all pairs of CYS residues form cystines Ext. coefficient 85720 Absorption 0.1% (=1 g/l) 0.937, assuming all CYS residues are reduced |
| Aromaticity: | 0.099 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 31.47 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [31.45, 28.92, 20.84] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 81.0964 |
| Grand average of hydropathicity (GRAVY): | -0.18 |