Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4261 |
| Number of amino acids: | 454 |
| Molecular Weight: | 50040.9 Da |
| Theoretical pI: | 6.68 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 41 | 9.03% |
| Cysteine CYS (C) | 8 | 1.76% |
| Glutamic Acid GLU (E) | 23 | 5.07% |
| Aspartic Acid ASP (D) | 22 | 4.85% |
| Glycine GLY (G) | 37 | 8.15% |
| Phynylalanine PHE (F) | 16 | 3.52% |
| Isoleucine ILE (I) | 28 | 6.17% |
| Histidine HIS (H) | 12 | 2.64% |
| Lysine LYS (K) | 29 | 6.39% |
| Methionine MET (M) | 7 | 1.54% |
| Leucine LEU (L) | 46 | 10.13% |
| Asparagine ASN (N) | 28 | 6.17% |
| Glutamine GLN (Q) | 20 | 4.41% |
| Proline PRO (P) | 18 | 3.96% |
| Serine SER (S) | 32 | 7.05% |
| Arginine ARG (R) | 14 | 3.08% |
| Threonine THR (T) | 19 | 4.19% |
| Tryptophan TRP (W) | 5 | 1.1% |
| Valine VAL (V) | 26 | 5.73% |
| Tyrosine TYR (Y) | 23 | 5.07% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 2243 |
| Hydrogen | H | 3488 |
| Nitrogen | N | 602 |
| Oxygen | O | 667 |
| Sulphur | S | 15 |
| Formula | C2243H3488N602O667S15 |
| Total Number of Atoms: | 7015 |
| Total number of positively charged residues (ARG + LYS): | 43 |
| Total number of negatively charged residues (ASP + GLU): | 45 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 62270 Absorption 0.1% (=1 g/l) 1.244, assuming all pairs of CYS residues form cystines Ext. coefficient 61770 Absorption 0.1% (=1 g/l) 1.234, assuming all CYS residues are reduced |
| Aromaticity: | 0.097 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 44.33 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [31.72, 25.33, 25.77] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 89.2072 |
| Grand average of hydropathicity (GRAVY): | -0.21 |