Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4258 |
| Number of amino acids: | 697 |
| Molecular Weight: | 78639.98 Da |
| Theoretical pI: | 6.28 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 32 | 4.59% |
| Cysteine CYS (C) | 6 | 0.86% |
| Glutamic Acid GLU (E) | 36 | 5.16% |
| Aspartic Acid ASP (D) | 40 | 5.74% |
| Glycine GLY (G) | 53 | 7.6% |
| Phynylalanine PHE (F) | 34 | 4.88% |
| Isoleucine ILE (I) | 37 | 5.31% |
| Histidine HIS (H) | 13 | 1.87% |
| Lysine LYS (K) | 43 | 6.17% |
| Methionine MET (M) | 17 | 2.44% |
| Leucine LEU (L) | 72 | 10.33% |
| Asparagine ASN (N) | 36 | 5.16% |
| Glutamine GLN (Q) | 23 | 3.3% |
| Proline PRO (P) | 44 | 6.31% |
| Serine SER (S) | 51 | 7.32% |
| Arginine ARG (R) | 28 | 4.02% |
| Threonine THR (T) | 36 | 5.16% |
| Tryptophan TRP (W) | 15 | 2.15% |
| Valine VAL (V) | 50 | 7.17% |
| Tyrosine TYR (Y) | 31 | 4.45% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 3579 |
| Hydrogen | H | 5498 |
| Nitrogen | N | 924 |
| Oxygen | O | 1027 |
| Sulphur | S | 23 |
| Formula | C3579H5498N924O1027S23 |
| Total Number of Atoms: | 11051 |
| Total number of positively charged residues (ARG + LYS): | 71 |
| Total number of negatively charged residues (ASP + GLU): | 76 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 129065 Absorption 0.1% (=1 g/l) 1.641, assuming all pairs of CYS residues form cystines Ext. coefficient 128690 Absorption 0.1% (=1 g/l) 1.636, assuming all CYS residues are reduced |
| Aromaticity: | 0.115 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 36.66 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [34.29, 26.40, 22.53] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 86.3845 |
| Grand average of hydropathicity (GRAVY): | -0.24 |