Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4252 |
| Number of amino acids: | 761 |
| Molecular Weight: | 84670.28 Da |
| Theoretical pI: | 5.66 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 32 | 4.2% |
| Cysteine CYS (C) | 29 | 3.81% |
| Glutamic Acid GLU (E) | 50 | 6.57% |
| Aspartic Acid ASP (D) | 45 | 5.91% |
| Glycine GLY (G) | 59 | 7.75% |
| Phynylalanine PHE (F) | 33 | 4.34% |
| Isoleucine ILE (I) | 42 | 5.52% |
| Histidine HIS (H) | 9 | 1.18% |
| Lysine LYS (K) | 47 | 6.18% |
| Methionine MET (M) | 17 | 2.23% |
| Leucine LEU (L) | 54 | 7.1% |
| Asparagine ASN (N) | 43 | 5.65% |
| Glutamine GLN (Q) | 27 | 3.55% |
| Proline PRO (P) | 35 | 4.6% |
| Serine SER (S) | 64 | 8.41% |
| Arginine ARG (R) | 38 | 4.99% |
| Threonine THR (T) | 36 | 4.73% |
| Tryptophan TRP (W) | 6 | 0.79% |
| Valine VAL (V) | 68 | 8.94% |
| Tyrosine TYR (Y) | 27 | 3.55% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 3720 |
| Hydrogen | H | 5854 |
| Nitrogen | N | 1016 |
| Oxygen | O | 1149 |
| Sulphur | S | 46 |
| Formula | C3720H5854N1016O1149S46 |
| Total Number of Atoms: | 11785 |
| Total number of positively charged residues (ARG + LYS): | 85 |
| Total number of negatively charged residues (ASP + GLU): | 95 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 74980 Absorption 0.1% (=1 g/l) 0.886, assuming all pairs of CYS residues form cystines Ext. coefficient 73230 Absorption 0.1% (=1 g/l) 0.865, assuming all CYS residues are reduced |
| Aromaticity: | 0.087 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 44.72 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [30.22, 26.41, 20.11] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 79.3167 |
| Grand average of hydropathicity (GRAVY): | -0.29 |