Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4251 |
| Number of amino acids: | 479 |
| Molecular Weight: | 53256.32 Da |
| Theoretical pI: | 7.81 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 32 | 6.68% |
| Cysteine CYS (C) | 7 | 1.46% |
| Glutamic Acid GLU (E) | 21 | 4.38% |
| Aspartic Acid ASP (D) | 17 | 3.55% |
| Glycine GLY (G) | 40 | 8.35% |
| Phynylalanine PHE (F) | 13 | 2.71% |
| Isoleucine ILE (I) | 25 | 5.22% |
| Histidine HIS (H) | 12 | 2.51% |
| Lysine LYS (K) | 11 | 2.3% |
| Methionine MET (M) | 11 | 2.3% |
| Leucine LEU (L) | 46 | 9.6% |
| Asparagine ASN (N) | 32 | 6.68% |
| Glutamine GLN (Q) | 60 | 12.53% |
| Proline PRO (P) | 27 | 5.64% |
| Serine SER (S) | 22 | 4.59% |
| Arginine ARG (R) | 28 | 5.85% |
| Threonine THR (T) | 22 | 4.59% |
| Tryptophan TRP (W) | 4 | 0.84% |
| Valine VAL (V) | 37 | 7.72% |
| Tyrosine TYR (Y) | 12 | 2.51% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 2328 |
| Hydrogen | H | 3704 |
| Nitrogen | N | 694 |
| Oxygen | O | 704 |
| Sulphur | S | 18 |
| Formula | C2328H3704N694O704S18 |
| Total Number of Atoms: | 7448 |
| Total number of positively charged residues (ARG + LYS): | 39 |
| Total number of negatively charged residues (ASP + GLU): | 38 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 40255 Absorption 0.1% (=1 g/l) 0.756, assuming all pairs of CYS residues form cystines Ext. coefficient 39880 Absorption 0.1% (=1 g/l) 0.749, assuming all CYS residues are reduced |
| Aromaticity: | 0.061 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 45.84 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [28.60, 25.26, 22.96] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 86.8894 |
| Grand average of hydropathicity (GRAVY): | -0.41 |