Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4250 |
| Number of amino acids: | 683 |
| Molecular Weight: | 75908.01 Da |
| Theoretical pI: | 7.51 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 44 | 6.44% |
| Cysteine CYS (C) | 21 | 3.07% |
| Glutamic Acid GLU (E) | 37 | 5.42% |
| Aspartic Acid ASP (D) | 35 | 5.12% |
| Glycine GLY (G) | 54 | 7.91% |
| Phynylalanine PHE (F) | 39 | 5.71% |
| Isoleucine ILE (I) | 43 | 6.3% |
| Histidine HIS (H) | 9 | 1.32% |
| Lysine LYS (K) | 35 | 5.12% |
| Methionine MET (M) | 11 | 1.61% |
| Leucine LEU (L) | 71 | 10.4% |
| Asparagine ASN (N) | 32 | 4.69% |
| Glutamine GLN (Q) | 21 | 3.07% |
| Proline PRO (P) | 29 | 4.25% |
| Serine SER (S) | 61 | 8.93% |
| Arginine ARG (R) | 38 | 5.56% |
| Threonine THR (T) | 29 | 4.25% |
| Tryptophan TRP (W) | 8 | 1.17% |
| Valine VAL (V) | 42 | 6.15% |
| Tyrosine TYR (Y) | 24 | 3.51% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 3401 |
| Hydrogen | H | 5311 |
| Nitrogen | N | 911 |
| Oxygen | O | 995 |
| Sulphur | S | 32 |
| Formula | C3401H5311N911O995S32 |
| Total Number of Atoms: | 10650 |
| Total number of positively charged residues (ARG + LYS): | 73 |
| Total number of negatively charged residues (ASP + GLU): | 72 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 81010 Absorption 0.1% (=1 g/l) 1.067, assuming all pairs of CYS residues form cystines Ext. coefficient 79760 Absorption 0.1% (=1 g/l) 1.051, assuming all CYS residues are reduced |
| Aromaticity: | 0.104 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 44.37 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [33.24, 25.77, 23.87] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 89.3704 |
| Grand average of hydropathicity (GRAVY): | -0.07 |