Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4249 |
| Number of amino acids: | 503 |
| Molecular Weight: | 53899.46 Da |
| Theoretical pI: | 5.54 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 70 | 13.92% |
| Cysteine CYS (C) | 8 | 1.59% |
| Glutamic Acid GLU (E) | 13 | 2.58% |
| Aspartic Acid ASP (D) | 39 | 7.75% |
| Glycine GLY (G) | 46 | 9.15% |
| Phynylalanine PHE (F) | 24 | 4.77% |
| Isoleucine ILE (I) | 10 | 1.99% |
| Histidine HIS (H) | 12 | 2.39% |
| Lysine LYS (K) | 17 | 3.38% |
| Methionine MET (M) | 10 | 1.99% |
| Leucine LEU (L) | 45 | 8.95% |
| Asparagine ASN (N) | 11 | 2.19% |
| Glutamine GLN (Q) | 15 | 2.98% |
| Proline PRO (P) | 26 | 5.17% |
| Serine SER (S) | 46 | 9.15% |
| Arginine ARG (R) | 24 | 4.77% |
| Threonine THR (T) | 21 | 4.17% |
| Tryptophan TRP (W) | 7 | 1.39% |
| Valine VAL (V) | 33 | 6.56% |
| Tyrosine TYR (Y) | 26 | 5.17% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 2408 |
| Hydrogen | H | 3649 |
| Nitrogen | N | 649 |
| Oxygen | O | 727 |
| Sulphur | S | 18 |
| Formula | C2408H3649N649O727S18 |
| Total Number of Atoms: | 7451 |
| Total number of positively charged residues (ARG + LYS): | 41 |
| Total number of negatively charged residues (ASP + GLU): | 52 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 77740 Absorption 0.1% (=1 g/l) 1.442, assuming all pairs of CYS residues form cystines Ext. coefficient 77240 Absorption 0.1% (=1 g/l) 1.433, assuming all CYS residues are reduced |
| Aromaticity: | 0.113 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 39.20 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [28.83, 25.65, 27.44] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 75.5865 |
| Grand average of hydropathicity (GRAVY): | -0.10 |