Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4248 |
| Number of amino acids: | 350 |
| Molecular Weight: | 37407.23 Da |
| Theoretical pI: | 6.42 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 28 | 8% |
| Cysteine CYS (C) | 11 | 3.14% |
| Glutamic Acid GLU (E) | 8 | 2.29% |
| Aspartic Acid ASP (D) | 14 | 4% |
| Glycine GLY (G) | 32 | 9.14% |
| Phynylalanine PHE (F) | 23 | 6.57% |
| Isoleucine ILE (I) | 32 | 9.14% |
| Histidine HIS (H) | 11 | 3.14% |
| Lysine LYS (K) | 15 | 4.29% |
| Methionine MET (M) | 14 | 4% |
| Leucine LEU (L) | 43 | 12.29% |
| Asparagine ASN (N) | 10 | 2.86% |
| Glutamine GLN (Q) | 6 | 1.71% |
| Proline PRO (P) | 13 | 3.71% |
| Serine SER (S) | 28 | 8% |
| Arginine ARG (R) | 4 | 1.14% |
| Threonine THR (T) | 24 | 6.86% |
| Tryptophan TRP (W) | 2 | 0.57% |
| Valine VAL (V) | 25 | 7.14% |
| Tyrosine TYR (Y) | 7 | 2% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1709 |
| Hydrogen | H | 2697 |
| Nitrogen | N | 417 |
| Oxygen | O | 470 |
| Sulphur | S | 25 |
| Formula | C1709H2697N417O470S25 |
| Total Number of Atoms: | 5318 |
| Total number of positively charged residues (ARG + LYS): | 19 |
| Total number of negatively charged residues (ASP + GLU): | 22 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 22055 Absorption 0.1% (=1 g/l) 0.590, assuming all pairs of CYS residues form cystines Ext. coefficient 21430 Absorption 0.1% (=1 g/l) 0.573, assuming all CYS residues are reduced |
| Aromaticity: | 0.091 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 33.52 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [37.71, 23.71, 26.57] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 112.286 |
| Grand average of hydropathicity (GRAVY): | 0.72 |