Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4243 |
| Number of amino acids: | 484 |
| Molecular Weight: | 54447.71 Da |
| Theoretical pI: | 5.88 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 26 | 5.37% |
| Cysteine CYS (C) | 5 | 1.03% |
| Glutamic Acid GLU (E) | 45 | 9.3% |
| Aspartic Acid ASP (D) | 16 | 3.31% |
| Glycine GLY (G) | 33 | 6.82% |
| Phynylalanine PHE (F) | 14 | 2.89% |
| Isoleucine ILE (I) | 26 | 5.37% |
| Histidine HIS (H) | 11 | 2.27% |
| Lysine LYS (K) | 14 | 2.89% |
| Methionine MET (M) | 1 | 0.21% |
| Leucine LEU (L) | 48 | 9.92% |
| Asparagine ASN (N) | 31 | 6.4% |
| Glutamine GLN (Q) | 38 | 7.85% |
| Proline PRO (P) | 29 | 5.99% |
| Serine SER (S) | 41 | 8.47% |
| Arginine ARG (R) | 39 | 8.06% |
| Threonine THR (T) | 22 | 4.55% |
| Tryptophan TRP (W) | 3 | 0.62% |
| Valine VAL (V) | 29 | 5.99% |
| Tyrosine TYR (Y) | 13 | 2.69% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 2372 |
| Hydrogen | H | 3773 |
| Nitrogen | N | 709 |
| Oxygen | O | 752 |
| Sulphur | S | 6 |
| Formula | C2372H3773N709O752S6 |
| Total Number of Atoms: | 7612 |
| Total number of positively charged residues (ARG + LYS): | 53 |
| Total number of negatively charged residues (ASP + GLU): | 61 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 36120 Absorption 0.1% (=1 g/l) 0.663, assuming all pairs of CYS residues form cystines Ext. coefficient 35870 Absorption 0.1% (=1 g/l) 0.659, assuming all CYS residues are reduced |
| Aromaticity: | 0.062 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 61.80 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [27.48, 27.69, 24.79] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 82.3761 |
| Grand average of hydropathicity (GRAVY): | -0.67 |