Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4242 |
| Number of amino acids: | 503 |
| Molecular Weight: | 56895.12 Da |
| Theoretical pI: | 5.7 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 28 | 5.57% |
| Cysteine CYS (C) | 6 | 1.19% |
| Glutamic Acid GLU (E) | 59 | 11.73% |
| Aspartic Acid ASP (D) | 16 | 3.18% |
| Glycine GLY (G) | 33 | 6.56% |
| Phynylalanine PHE (F) | 17 | 3.38% |
| Isoleucine ILE (I) | 23 | 4.57% |
| Histidine HIS (H) | 16 | 3.18% |
| Lysine LYS (K) | 19 | 3.78% |
| Methionine MET (M) | 1 | 0.2% |
| Leucine LEU (L) | 45 | 8.95% |
| Asparagine ASN (N) | 27 | 5.37% |
| Glutamine GLN (Q) | 32 | 6.36% |
| Proline PRO (P) | 27 | 5.37% |
| Serine SER (S) | 47 | 9.34% |
| Arginine ARG (R) | 42 | 8.35% |
| Threonine THR (T) | 20 | 3.98% |
| Tryptophan TRP (W) | 3 | 0.6% |
| Valine VAL (V) | 30 | 5.96% |
| Tyrosine TYR (Y) | 12 | 2.39% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 2470 |
| Hydrogen | H | 3908 |
| Nitrogen | N | 742 |
| Oxygen | O | 792 |
| Sulphur | S | 7 |
| Formula | C2470H3908N742O792S7 |
| Total Number of Atoms: | 7919 |
| Total number of positively charged residues (ARG + LYS): | 61 |
| Total number of negatively charged residues (ASP + GLU): | 75 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 34755 Absorption 0.1% (=1 g/l) 0.611, assuming all pairs of CYS residues form cystines Ext. coefficient 34380 Absorption 0.1% (=1 g/l) 0.604, assuming all CYS residues are reduced |
| Aromaticity: | 0.064 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 65.18 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [25.84, 26.64, 26.44] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 75.5864 |
| Grand average of hydropathicity (GRAVY): | -0.78 |