Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4235 |
| Number of amino acids: | 343 |
| Molecular Weight: | 37722.64 Da |
| Theoretical pI: | 5.12 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 33 | 9.62% |
| Cysteine CYS (C) | 3 | 0.87% |
| Glutamic Acid GLU (E) | 14 | 4.08% |
| Aspartic Acid ASP (D) | 16 | 4.66% |
| Glycine GLY (G) | 25 | 7.29% |
| Phynylalanine PHE (F) | 19 | 5.54% |
| Isoleucine ILE (I) | 27 | 7.87% |
| Histidine HIS (H) | 6 | 1.75% |
| Lysine LYS (K) | 15 | 4.37% |
| Methionine MET (M) | 6 | 1.75% |
| Leucine LEU (L) | 29 | 8.45% |
| Asparagine ASN (N) | 35 | 10.2% |
| Glutamine GLN (Q) | 19 | 5.54% |
| Proline PRO (P) | 19 | 5.54% |
| Serine SER (S) | 19 | 5.54% |
| Arginine ARG (R) | 6 | 1.75% |
| Threonine THR (T) | 13 | 3.79% |
| Tryptophan TRP (W) | 2 | 0.58% |
| Valine VAL (V) | 20 | 5.83% |
| Tyrosine TYR (Y) | 17 | 4.96% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1705 |
| Hydrogen | H | 2604 |
| Nitrogen | N | 444 |
| Oxygen | O | 507 |
| Sulphur | S | 9 |
| Formula | C1705H2604N444O507S9 |
| Total Number of Atoms: | 5269 |
| Total number of positively charged residues (ARG + LYS): | 21 |
| Total number of negatively charged residues (ASP + GLU): | 30 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 36455 Absorption 0.1% (=1 g/l) 0.966, assuming all pairs of CYS residues form cystines Ext. coefficient 36330 Absorption 0.1% (=1 g/l) 0.963, assuming all CYS residues are reduced |
| Aromaticity: | 0.111 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 38.30 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [33.24, 28.57, 23.91] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 90.2041 |
| Grand average of hydropathicity (GRAVY): | -0.12 |