Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4234 |
| Number of amino acids: | 785 |
| Molecular Weight: | 86045.01 Da |
| Theoretical pI: | 8.27 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 67 | 8.54% |
| Cysteine CYS (C) | 7 | 0.89% |
| Glutamic Acid GLU (E) | 57 | 7.26% |
| Aspartic Acid ASP (D) | 42 | 5.35% |
| Glycine GLY (G) | 41 | 5.22% |
| Phynylalanine PHE (F) | 39 | 4.97% |
| Isoleucine ILE (I) | 28 | 3.57% |
| Histidine HIS (H) | 6 | 0.76% |
| Lysine LYS (K) | 53 | 6.75% |
| Methionine MET (M) | 15 | 1.91% |
| Leucine LEU (L) | 78 | 9.94% |
| Asparagine ASN (N) | 29 | 3.69% |
| Glutamine GLN (Q) | 20 | 2.55% |
| Proline PRO (P) | 74 | 9.43% |
| Serine SER (S) | 83 | 10.57% |
| Arginine ARG (R) | 49 | 6.24% |
| Threonine THR (T) | 40 | 5.1% |
| Tryptophan TRP (W) | 7 | 0.89% |
| Valine VAL (V) | 43 | 5.48% |
| Tyrosine TYR (Y) | 7 | 0.89% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 3817 |
| Hydrogen | H | 6089 |
| Nitrogen | N | 1053 |
| Oxygen | O | 1163 |
| Sulphur | S | 22 |
| Formula | C3817H6089N1053O1163S22 |
| Total Number of Atoms: | 12144 |
| Total number of positively charged residues (ARG + LYS): | 102 |
| Total number of negatively charged residues (ASP + GLU): | 99 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 49305 Absorption 0.1% (=1 g/l) 0.573, assuming all pairs of CYS residues form cystines Ext. coefficient 48930 Absorption 0.1% (=1 g/l) 0.569, assuming all CYS residues are reduced |
| Aromaticity: | 0.068 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 59.91 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [25.73, 28.92, 27.64] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 77.0828 |
| Grand average of hydropathicity (GRAVY): | -0.42 |