Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4226 |
| Number of amino acids: | 766 |
| Molecular Weight: | 84164.63 Da |
| Theoretical pI: | 5.45 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 53 | 6.92% |
| Cysteine CYS (C) | 7 | 0.91% |
| Glutamic Acid GLU (E) | 29 | 3.79% |
| Aspartic Acid ASP (D) | 46 | 6.01% |
| Glycine GLY (G) | 43 | 5.61% |
| Phynylalanine PHE (F) | 50 | 6.53% |
| Isoleucine ILE (I) | 39 | 5.09% |
| Histidine HIS (H) | 6 | 0.78% |
| Lysine LYS (K) | 37 | 4.83% |
| Methionine MET (M) | 11 | 1.44% |
| Leucine LEU (L) | 78 | 10.18% |
| Asparagine ASN (N) | 34 | 4.44% |
| Glutamine GLN (Q) | 30 | 3.92% |
| Proline PRO (P) | 45 | 5.87% |
| Serine SER (S) | 85 | 11.1% |
| Arginine ARG (R) | 29 | 3.79% |
| Threonine THR (T) | 57 | 7.44% |
| Tryptophan TRP (W) | 7 | 0.91% |
| Valine VAL (V) | 56 | 7.31% |
| Tyrosine TYR (Y) | 24 | 3.13% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 3801 |
| Hydrogen | H | 5907 |
| Nitrogen | N | 973 |
| Oxygen | O | 1147 |
| Sulphur | S | 18 |
| Formula | C3801H5907N973O1147S18 |
| Total Number of Atoms: | 11846 |
| Total number of positively charged residues (ARG + LYS): | 66 |
| Total number of negatively charged residues (ASP + GLU): | 75 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 74635 Absorption 0.1% (=1 g/l) 0.887, assuming all pairs of CYS residues form cystines Ext. coefficient 74260 Absorption 0.1% (=1 g/l) 0.882, assuming all CYS residues are reduced |
| Aromaticity: | 0.106 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 42.96 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [33.16, 27.02, 22.32] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 87.6894 |
| Grand average of hydropathicity (GRAVY): | -0.04 |