Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4225 |
| Number of amino acids: | 763 |
| Molecular Weight: | 83787.84 Da |
| Theoretical pI: | 5 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 49 | 6.42% |
| Cysteine CYS (C) | 8 | 1.05% |
| Glutamic Acid GLU (E) | 30 | 3.93% |
| Aspartic Acid ASP (D) | 47 | 6.16% |
| Glycine GLY (G) | 45 | 5.9% |
| Phynylalanine PHE (F) | 47 | 6.16% |
| Isoleucine ILE (I) | 46 | 6.03% |
| Histidine HIS (H) | 5 | 0.66% |
| Lysine LYS (K) | 30 | 3.93% |
| Methionine MET (M) | 6 | 0.79% |
| Leucine LEU (L) | 77 | 10.09% |
| Asparagine ASN (N) | 42 | 5.5% |
| Glutamine GLN (Q) | 30 | 3.93% |
| Proline PRO (P) | 41 | 5.37% |
| Serine SER (S) | 81 | 10.62% |
| Arginine ARG (R) | 31 | 4.06% |
| Threonine THR (T) | 55 | 7.21% |
| Tryptophan TRP (W) | 5 | 0.66% |
| Valine VAL (V) | 61 | 7.99% |
| Tyrosine TYR (Y) | 27 | 3.54% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 3775 |
| Hydrogen | H | 5875 |
| Nitrogen | N | 973 |
| Oxygen | O | 1153 |
| Sulphur | S | 14 |
| Formula | C3775H5875N973O1153S14 |
| Total Number of Atoms: | 11790 |
| Total number of positively charged residues (ARG + LYS): | 61 |
| Total number of negatively charged residues (ASP + GLU): | 77 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 68230 Absorption 0.1% (=1 g/l) 0.814, assuming all pairs of CYS residues form cystines Ext. coefficient 67730 Absorption 0.1% (=1 g/l) 0.808, assuming all CYS residues are reduced |
| Aromaticity: | 0.104 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 41.33 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [34.47, 27.39, 21.23] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 92.4769 |
| Grand average of hydropathicity (GRAVY): | -0.02 |