Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4220 |
| Number of amino acids: | 757 |
| Molecular Weight: | 79415.37 Da |
| Theoretical pI: | 5.92 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 73 | 9.64% |
| Cysteine CYS (C) | 12 | 1.59% |
| Glutamic Acid GLU (E) | 29 | 3.83% |
| Aspartic Acid ASP (D) | 39 | 5.15% |
| Glycine GLY (G) | 76 | 10.04% |
| Phynylalanine PHE (F) | 26 | 3.43% |
| Isoleucine ILE (I) | 36 | 4.76% |
| Histidine HIS (H) | 16 | 2.11% |
| Lysine LYS (K) | 32 | 4.23% |
| Methionine MET (M) | 14 | 1.85% |
| Leucine LEU (L) | 59 | 7.79% |
| Asparagine ASN (N) | 30 | 3.96% |
| Glutamine GLN (Q) | 6 | 0.79% |
| Proline PRO (P) | 41 | 5.42% |
| Serine SER (S) | 91 | 12.02% |
| Arginine ARG (R) | 26 | 3.43% |
| Threonine THR (T) | 59 | 7.79% |
| Tryptophan TRP (W) | 9 | 1.19% |
| Valine VAL (V) | 57 | 7.53% |
| Tyrosine TYR (Y) | 26 | 3.43% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 3508 |
| Hydrogen | H | 5486 |
| Nitrogen | N | 944 |
| Oxygen | O | 1106 |
| Sulphur | S | 26 |
| Formula | C3508H5486N944O1106S26 |
| Total Number of Atoms: | 11070 |
| Total number of positively charged residues (ARG + LYS): | 58 |
| Total number of negatively charged residues (ASP + GLU): | 68 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 88990 Absorption 0.1% (=1 g/l) 1.121, assuming all pairs of CYS residues form cystines Ext. coefficient 88240 Absorption 0.1% (=1 g/l) 1.111, assuming all CYS residues are reduced |
| Aromaticity: | 0.081 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 33.25 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [28.14, 31.44, 23.12] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 80.4227 |
| Grand average of hydropathicity (GRAVY): | -0.03 |