Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4217 |
| Number of amino acids: | 167 |
| Molecular Weight: | 17237.24 Da |
| Theoretical pI: | 5.67 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 20 | 11.98% |
| Cysteine CYS (C) | 7 | 4.19% |
| Glutamic Acid GLU (E) | 6 | 3.59% |
| Aspartic Acid ASP (D) | 14 | 8.38% |
| Glycine GLY (G) | 23 | 13.77% |
| Phynylalanine PHE (F) | 3 | 1.8% |
| Isoleucine ILE (I) | 3 | 1.8% |
| Histidine HIS (H) | 5 | 2.99% |
| Lysine LYS (K) | 3 | 1.8% |
| Methionine MET (M) | 4 | 2.4% |
| Leucine LEU (L) | 11 | 6.59% |
| Asparagine ASN (N) | 4 | 2.4% |
| Glutamine GLN (Q) | 2 | 1.2% |
| Proline PRO (P) | 8 | 4.79% |
| Serine SER (S) | 14 | 8.38% |
| Arginine ARG (R) | 13 | 7.78% |
| Threonine THR (T) | 8 | 4.79% |
| Tryptophan TRP (W) | 3 | 1.8% |
| Valine VAL (V) | 15 | 8.98% |
| Tyrosine TYR (Y) | 1 | 0.6% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 727 |
| Hydrogen | H | 1158 |
| Nitrogen | N | 228 |
| Oxygen | O | 237 |
| Sulphur | S | 11 |
| Formula | C727H1158N228O237S11 |
| Total Number of Atoms: | 2361 |
| Total number of positively charged residues (ARG + LYS): | 16 |
| Total number of negatively charged residues (ASP + GLU): | 20 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 18365 Absorption 0.1% (=1 g/l) 1.065, assuming all pairs of CYS residues form cystines Ext. coefficient 17990 Absorption 0.1% (=1 g/l) 1.044, assuming all CYS residues are reduced |
| Aromaticity: | 0.042 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 55.81 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [21.56, 29.34, 24.55] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 70.7186 |
| Grand average of hydropathicity (GRAVY): | -0.19 |