Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4210 |
| Number of amino acids: | 216 |
| Molecular Weight: | 23903.96 Da |
| Theoretical pI: | 5.39 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 16 | 7.41% |
| Cysteine CYS (C) | 4 | 1.85% |
| Glutamic Acid GLU (E) | 10 | 4.63% |
| Aspartic Acid ASP (D) | 13 | 6.02% |
| Glycine GLY (G) | 13 | 6.02% |
| Phynylalanine PHE (F) | 12 | 5.56% |
| Isoleucine ILE (I) | 12 | 5.56% |
| Histidine HIS (H) | 3 | 1.39% |
| Lysine LYS (K) | 9 | 4.17% |
| Methionine MET (M) | 3 | 1.39% |
| Leucine LEU (L) | 17 | 7.87% |
| Asparagine ASN (N) | 18 | 8.33% |
| Glutamine GLN (Q) | 4 | 1.85% |
| Proline PRO (P) | 12 | 5.56% |
| Serine SER (S) | 18 | 8.33% |
| Arginine ARG (R) | 10 | 4.63% |
| Threonine THR (T) | 13 | 6.02% |
| Tryptophan TRP (W) | 2 | 0.93% |
| Valine VAL (V) | 18 | 8.33% |
| Tyrosine TYR (Y) | 9 | 4.17% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1068 |
| Hydrogen | H | 1647 |
| Nitrogen | N | 285 |
| Oxygen | O | 325 |
| Sulphur | S | 7 |
| Formula | C1068H1647N285O325S7 |
| Total Number of Atoms: | 3332 |
| Total number of positively charged residues (ARG + LYS): | 19 |
| Total number of negatively charged residues (ASP + GLU): | 23 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 24660 Absorption 0.1% (=1 g/l) 1.032, assuming all pairs of CYS residues form cystines Ext. coefficient 24410 Absorption 0.1% (=1 g/l) 1.021, assuming all CYS residues are reduced |
| Aromaticity: | 0.106 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 30.94 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [32.41, 28.24, 21.30] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 83.9352 |
| Grand average of hydropathicity (GRAVY): | -0.17 |