Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4208 |
| Number of amino acids: | 459 |
| Molecular Weight: | 51626.04 Da |
| Theoretical pI: | 9.18 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 24 | 5.23% |
| Cysteine CYS (C) | 10 | 2.18% |
| Glutamic Acid GLU (E) | 21 | 4.58% |
| Aspartic Acid ASP (D) | 19 | 4.14% |
| Glycine GLY (G) | 26 | 5.66% |
| Phynylalanine PHE (F) | 28 | 6.1% |
| Isoleucine ILE (I) | 22 | 4.79% |
| Histidine HIS (H) | 13 | 2.83% |
| Lysine LYS (K) | 29 | 6.32% |
| Methionine MET (M) | 12 | 2.61% |
| Leucine LEU (L) | 59 | 12.85% |
| Asparagine ASN (N) | 20 | 4.36% |
| Glutamine GLN (Q) | 6 | 1.31% |
| Proline PRO (P) | 21 | 4.58% |
| Serine SER (S) | 44 | 9.59% |
| Arginine ARG (R) | 24 | 5.23% |
| Threonine THR (T) | 28 | 6.1% |
| Tryptophan TRP (W) | 4 | 0.87% |
| Valine VAL (V) | 33 | 7.19% |
| Tyrosine TYR (Y) | 16 | 3.49% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 2341 |
| Hydrogen | H | 3682 |
| Nitrogen | N | 616 |
| Oxygen | O | 654 |
| Sulphur | S | 22 |
| Formula | C2341H3682N616O654S22 |
| Total Number of Atoms: | 7315 |
| Total number of positively charged residues (ARG + LYS): | 53 |
| Total number of negatively charged residues (ASP + GLU): | 40 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 46465 Absorption 0.1% (=1 g/l) 0.900, assuming all pairs of CYS residues form cystines Ext. coefficient 45840 Absorption 0.1% (=1 g/l) 0.888, assuming all CYS residues are reduced |
| Aromaticity: | 0.105 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 35.23 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [35.29, 24.18, 25.27] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 94.9018 |
| Grand average of hydropathicity (GRAVY): | 0.03 |