Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4207 |
| Number of amino acids: | 320 |
| Molecular Weight: | 33681.41 Da |
| Theoretical pI: | 4.84 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 38 | 11.88% |
| Cysteine CYS (C) | 19 | 5.94% |
| Glutamic Acid GLU (E) | 9 | 2.81% |
| Aspartic Acid ASP (D) | 19 | 5.94% |
| Glycine GLY (G) | 41 | 12.81% |
| Phynylalanine PHE (F) | 10 | 3.13% |
| Isoleucine ILE (I) | 10 | 3.13% |
| Histidine HIS (H) | 4 | 1.25% |
| Lysine LYS (K) | 10 | 3.13% |
| Methionine MET (M) | 5 | 1.56% |
| Leucine LEU (L) | 13 | 4.06% |
| Asparagine ASN (N) | 14 | 4.38% |
| Glutamine GLN (Q) | 14 | 4.38% |
| Proline PRO (P) | 24 | 7.5% |
| Serine SER (S) | 22 | 6.88% |
| Arginine ARG (R) | 9 | 2.81% |
| Threonine THR (T) | 18 | 5.63% |
| Tryptophan TRP (W) | 7 | 2.19% |
| Valine VAL (V) | 15 | 4.69% |
| Tyrosine TYR (Y) | 19 | 5.94% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1472 |
| Hydrogen | H | 2188 |
| Nitrogen | N | 400 |
| Oxygen | O | 464 |
| Sulphur | S | 24 |
| Formula | C1472H2188N400O464S24 |
| Total Number of Atoms: | 4548 |
| Total number of positively charged residues (ARG + LYS): | 19 |
| Total number of negatively charged residues (ASP + GLU): | 28 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 67935 Absorption 0.1% (=1 g/l) 2.017, assuming all pairs of CYS residues form cystines Ext. coefficient 66810 Absorption 0.1% (=1 g/l) 1.984, assuming all CYS residues are reduced |
| Aromaticity: | 0.112 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 34.59 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [23.12, 31.56, 20.31] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 53.5 |
| Grand average of hydropathicity (GRAVY): | -0.29 |