Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4203 |
| Number of amino acids: | 469 |
| Molecular Weight: | 50582.81 Da |
| Theoretical pI: | 5.84 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 30 | 6.4% |
| Cysteine CYS (C) | 8 | 1.71% |
| Glutamic Acid GLU (E) | 23 | 4.9% |
| Aspartic Acid ASP (D) | 31 | 6.61% |
| Glycine GLY (G) | 44 | 9.38% |
| Phynylalanine PHE (F) | 23 | 4.9% |
| Isoleucine ILE (I) | 17 | 3.62% |
| Histidine HIS (H) | 39 | 8.32% |
| Lysine LYS (K) | 21 | 4.48% |
| Methionine MET (M) | 9 | 1.92% |
| Leucine LEU (L) | 60 | 12.79% |
| Asparagine ASN (N) | 15 | 3.2% |
| Glutamine GLN (Q) | 9 | 1.92% |
| Proline PRO (P) | 11 | 2.35% |
| Serine SER (S) | 60 | 12.79% |
| Arginine ARG (R) | 9 | 1.92% |
| Threonine THR (T) | 19 | 4.05% |
| Tryptophan TRP (W) | 5 | 1.07% |
| Valine VAL (V) | 32 | 6.82% |
| Tyrosine TYR (Y) | 4 | 0.85% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 2236 |
| Hydrogen | H | 3454 |
| Nitrogen | N | 624 |
| Oxygen | O | 685 |
| Sulphur | S | 17 |
| Formula | C2236H3454N624O685S17 |
| Total Number of Atoms: | 7016 |
| Total number of positively charged residues (ARG + LYS): | 30 |
| Total number of negatively charged residues (ASP + GLU): | 54 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 33960 Absorption 0.1% (=1 g/l) 0.671, assuming all pairs of CYS residues form cystines Ext. coefficient 33460 Absorption 0.1% (=1 g/l) 0.661, assuming all CYS residues are reduced |
| Aromaticity: | 0.068 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 38.28 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [30.06, 27.72, 26.01] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 90.2133 |
| Grand average of hydropathicity (GRAVY): | -0.07 |