Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4202 |
| Number of amino acids: | 213 |
| Molecular Weight: | 21356.09 Da |
| Theoretical pI: | 7.88 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 23 | 10.8% |
| Cysteine CYS (C) | 32 | 15.02% |
| Glutamic Acid GLU (E) | 5 | 2.35% |
| Aspartic Acid ASP (D) | 5 | 2.35% |
| Glycine GLY (G) | 42 | 19.72% |
| Phynylalanine PHE (F) | 6 | 2.82% |
| Isoleucine ILE (I) | 3 | 1.41% |
| Histidine HIS (H) | 2 | 0.94% |
| Lysine LYS (K) | 8 | 3.76% |
| Methionine MET (M) | 6 | 2.82% |
| Leucine LEU (L) | 9 | 4.23% |
| Asparagine ASN (N) | 11 | 5.16% |
| Glutamine GLN (Q) | 12 | 5.63% |
| Proline PRO (P) | 6 | 2.82% |
| Serine SER (S) | 16 | 7.51% |
| Arginine ARG (R) | 5 | 2.35% |
| Threonine THR (T) | 9 | 4.23% |
| Tryptophan TRP (W) | 3 | 1.41% |
| Valine VAL (V) | 3 | 1.41% |
| Tyrosine TYR (Y) | 7 | 3.29% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 869 |
| Hydrogen | H | 1340 |
| Nitrogen | N | 266 |
| Oxygen | O | 289 |
| Sulphur | S | 38 |
| Formula | C869H1340N266O289S38 |
| Total Number of Atoms: | 2802 |
| Total number of positively charged residues (ARG + LYS): | 13 |
| Total number of negatively charged residues (ASP + GLU): | 10 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 28930 Absorption 0.1% (=1 g/l) 1.355, assuming all pairs of CYS residues form cystines Ext. coefficient 26930 Absorption 0.1% (=1 g/l) 1.261, assuming all CYS residues are reduced |
| Aromaticity: | 0.075 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 34.49 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [14.55, 35.21, 20.19] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 36.8544 |
| Grand average of hydropathicity (GRAVY): | -0.11 |