Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4199 |
| Number of amino acids: | 899 |
| Molecular Weight: | 98649.75 Da |
| Theoretical pI: | 9.34 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 60 | 6.67% |
| Cysteine CYS (C) | 3 | 0.33% |
| Glutamic Acid GLU (E) | 58 | 6.45% |
| Aspartic Acid ASP (D) | 41 | 4.56% |
| Glycine GLY (G) | 49 | 5.45% |
| Phynylalanine PHE (F) | 45 | 5.01% |
| Isoleucine ILE (I) | 25 | 2.78% |
| Histidine HIS (H) | 15 | 1.67% |
| Lysine LYS (K) | 62 | 6.9% |
| Methionine MET (M) | 18 | 2% |
| Leucine LEU (L) | 77 | 8.57% |
| Asparagine ASN (N) | 31 | 3.45% |
| Glutamine GLN (Q) | 32 | 3.56% |
| Proline PRO (P) | 96 | 10.68% |
| Serine SER (S) | 102 | 11.35% |
| Arginine ARG (R) | 54 | 6.01% |
| Threonine THR (T) | 64 | 7.12% |
| Tryptophan TRP (W) | 2 | 0.22% |
| Valine VAL (V) | 50 | 5.56% |
| Tyrosine TYR (Y) | 15 | 1.67% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 4367 |
| Hydrogen | H | 6938 |
| Nitrogen | N | 1218 |
| Oxygen | O | 1342 |
| Sulphur | S | 21 |
| Formula | C4367H6938N1218O1342S21 |
| Total Number of Atoms: | 13886 |
| Total number of positively charged residues (ARG + LYS): | 116 |
| Total number of negatively charged residues (ASP + GLU): | 99 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 33475 Absorption 0.1% (=1 g/l) 0.339, assuming all pairs of CYS residues form cystines Ext. coefficient 33350 Absorption 0.1% (=1 g/l) 0.338, assuming all CYS residues are reduced |
| Aromaticity: | 0.069 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 54.92 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [23.80, 30.92, 23.69] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 67.0523 |
| Grand average of hydropathicity (GRAVY): | -0.59 |