Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4198 |
| Number of amino acids: | 391 |
| Molecular Weight: | 43328.82 Da |
| Theoretical pI: | 5 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 32 | 8.18% |
| Cysteine CYS (C) | 10 | 2.56% |
| Glutamic Acid GLU (E) | 22 | 5.63% |
| Aspartic Acid ASP (D) | 20 | 5.12% |
| Glycine GLY (G) | 28 | 7.16% |
| Phynylalanine PHE (F) | 34 | 8.7% |
| Isoleucine ILE (I) | 22 | 5.63% |
| Histidine HIS (H) | 10 | 2.56% |
| Lysine LYS (K) | 16 | 4.09% |
| Methionine MET (M) | 3 | 0.77% |
| Leucine LEU (L) | 31 | 7.93% |
| Asparagine ASN (N) | 20 | 5.12% |
| Glutamine GLN (Q) | 8 | 2.05% |
| Proline PRO (P) | 24 | 6.14% |
| Serine SER (S) | 30 | 7.67% |
| Arginine ARG (R) | 10 | 2.56% |
| Threonine THR (T) | 28 | 7.16% |
| Tryptophan TRP (W) | 3 | 0.77% |
| Valine VAL (V) | 20 | 5.12% |
| Tyrosine TYR (Y) | 20 | 5.12% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1982 |
| Hydrogen | H | 2936 |
| Nitrogen | N | 488 |
| Oxygen | O | 582 |
| Sulphur | S | 13 |
| Formula | C1982H2936N488O582S13 |
| Total Number of Atoms: | 6001 |
| Total number of positively charged residues (ARG + LYS): | 26 |
| Total number of negatively charged residues (ASP + GLU): | 42 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 46925 Absorption 0.1% (=1 g/l) 1.083, assuming all pairs of CYS residues form cystines Ext. coefficient 46300 Absorption 0.1% (=1 g/l) 1.069, assuming all CYS residues are reduced |
| Aromaticity: | 0.146 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 36.88 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [33.25, 26.09, 22.51] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 75.8824 |
| Grand average of hydropathicity (GRAVY): | -0.06 |