Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4194 |
| Number of amino acids: | 884 |
| Molecular Weight: | 97966.21 Da |
| Theoretical pI: | 8.64 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 58 | 6.56% |
| Cysteine CYS (C) | 17 | 1.92% |
| Glutamic Acid GLU (E) | 59 | 6.67% |
| Aspartic Acid ASP (D) | 38 | 4.3% |
| Glycine GLY (G) | 39 | 4.41% |
| Phynylalanine PHE (F) | 31 | 3.51% |
| Isoleucine ILE (I) | 40 | 4.52% |
| Histidine HIS (H) | 30 | 3.39% |
| Lysine LYS (K) | 59 | 6.67% |
| Methionine MET (M) | 29 | 3.28% |
| Leucine LEU (L) | 93 | 10.52% |
| Asparagine ASN (N) | 45 | 5.09% |
| Glutamine GLN (Q) | 33 | 3.73% |
| Proline PRO (P) | 60 | 6.79% |
| Serine SER (S) | 96 | 10.86% |
| Arginine ARG (R) | 47 | 5.32% |
| Threonine THR (T) | 45 | 5.09% |
| Tryptophan TRP (W) | 2 | 0.23% |
| Valine VAL (V) | 52 | 5.88% |
| Tyrosine TYR (Y) | 11 | 1.24% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 4282 |
| Hydrogen | H | 6918 |
| Nitrogen | N | 1224 |
| Oxygen | O | 1309 |
| Sulphur | S | 46 |
| Formula | C4282H6918N1224O1309S46 |
| Total Number of Atoms: | 13779 |
| Total number of positively charged residues (ARG + LYS): | 106 |
| Total number of negatively charged residues (ASP + GLU): | 97 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 28390 Absorption 0.1% (=1 g/l) 0.290, assuming all pairs of CYS residues form cystines Ext. coefficient 27390 Absorption 0.1% (=1 g/l) 0.280, assuming all CYS residues are reduced |
| Aromaticity: | 0.050 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 55.03 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [25.91, 27.15, 27.04] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 82.2965 |
| Grand average of hydropathicity (GRAVY): | -0.39 |