Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4193 |
| Number of amino acids: | 330 |
| Molecular Weight: | 35858.54 Da |
| Theoretical pI: | 4.88 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 34 | 10.3% |
| Cysteine CYS (C) | 8 | 2.42% |
| Glutamic Acid GLU (E) | 14 | 4.24% |
| Aspartic Acid ASP (D) | 27 | 8.18% |
| Glycine GLY (G) | 20 | 6.06% |
| Phynylalanine PHE (F) | 20 | 6.06% |
| Isoleucine ILE (I) | 11 | 3.33% |
| Histidine HIS (H) | 4 | 1.21% |
| Lysine LYS (K) | 14 | 4.24% |
| Methionine MET (M) | 11 | 3.33% |
| Leucine LEU (L) | 26 | 7.88% |
| Asparagine ASN (N) | 17 | 5.15% |
| Glutamine GLN (Q) | 12 | 3.64% |
| Proline PRO (P) | 12 | 3.64% |
| Serine SER (S) | 29 | 8.79% |
| Arginine ARG (R) | 16 | 4.85% |
| Threonine THR (T) | 18 | 5.45% |
| Tryptophan TRP (W) | 1 | 0.3% |
| Valine VAL (V) | 30 | 9.09% |
| Tyrosine TYR (Y) | 6 | 1.82% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1567 |
| Hydrogen | H | 2466 |
| Nitrogen | N | 430 |
| Oxygen | O | 495 |
| Sulphur | S | 19 |
| Formula | C1567H2466N430O495S19 |
| Total Number of Atoms: | 4977 |
| Total number of positively charged residues (ARG + LYS): | 30 |
| Total number of negatively charged residues (ASP + GLU): | 41 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 14940 Absorption 0.1% (=1 g/l) 0.417, assuming all pairs of CYS residues form cystines Ext. coefficient 14440 Absorption 0.1% (=1 g/l) 0.403, assuming all CYS residues are reduced |
| Aromaticity: | 0.082 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 33.71 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [28.48, 23.64, 25.76] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 80.3939 |
| Grand average of hydropathicity (GRAVY): | -0.07 |