Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4188 |
| Number of amino acids: | 434 |
| Molecular Weight: | 48457.12 Da |
| Theoretical pI: | 9.05 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 32 | 7.37% |
| Cysteine CYS (C) | 9 | 2.07% |
| Glutamic Acid GLU (E) | 19 | 4.38% |
| Aspartic Acid ASP (D) | 25 | 5.76% |
| Glycine GLY (G) | 37 | 8.53% |
| Phynylalanine PHE (F) | 20 | 4.61% |
| Isoleucine ILE (I) | 34 | 7.83% |
| Histidine HIS (H) | 16 | 3.69% |
| Lysine LYS (K) | 31 | 7.14% |
| Methionine MET (M) | 7 | 1.61% |
| Leucine LEU (L) | 26 | 5.99% |
| Asparagine ASN (N) | 22 | 5.07% |
| Glutamine GLN (Q) | 16 | 3.69% |
| Proline PRO (P) | 13 | 3% |
| Serine SER (S) | 31 | 7.14% |
| Arginine ARG (R) | 23 | 5.3% |
| Threonine THR (T) | 25 | 5.76% |
| Tryptophan TRP (W) | 10 | 2.3% |
| Valine VAL (V) | 27 | 6.22% |
| Tyrosine TYR (Y) | 11 | 2.53% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 2157 |
| Hydrogen | H | 3362 |
| Nitrogen | N | 614 |
| Oxygen | O | 628 |
| Sulphur | S | 16 |
| Formula | C2157H3362N614O628S16 |
| Total Number of Atoms: | 6777 |
| Total number of positively charged residues (ARG + LYS): | 54 |
| Total number of negatively charged residues (ASP + GLU): | 44 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 71890 Absorption 0.1% (=1 g/l) 1.484, assuming all pairs of CYS residues form cystines Ext. coefficient 71390 Absorption 0.1% (=1 g/l) 1.473, assuming all CYS residues are reduced |
| Aromaticity: | 0.094 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 29.19 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [29.49, 23.73, 19.35] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 79.3318 |
| Grand average of hydropathicity (GRAVY): | -0.34 |