Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4187 |
| Number of amino acids: | 390 |
| Molecular Weight: | 43354.45 Da |
| Theoretical pI: | 9.38 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 27 | 6.92% |
| Cysteine CYS (C) | 8 | 2.05% |
| Glutamic Acid GLU (E) | 9 | 2.31% |
| Aspartic Acid ASP (D) | 22 | 5.64% |
| Glycine GLY (G) | 32 | 8.21% |
| Phynylalanine PHE (F) | 17 | 4.36% |
| Isoleucine ILE (I) | 31 | 7.95% |
| Histidine HIS (H) | 14 | 3.59% |
| Lysine LYS (K) | 20 | 5.13% |
| Methionine MET (M) | 7 | 1.79% |
| Leucine LEU (L) | 21 | 5.38% |
| Asparagine ASN (N) | 18 | 4.62% |
| Glutamine GLN (Q) | 6 | 1.54% |
| Proline PRO (P) | 21 | 5.38% |
| Serine SER (S) | 39 | 10% |
| Arginine ARG (R) | 25 | 6.41% |
| Threonine THR (T) | 18 | 4.62% |
| Tryptophan TRP (W) | 8 | 2.05% |
| Valine VAL (V) | 29 | 7.44% |
| Tyrosine TYR (Y) | 18 | 4.62% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1947 |
| Hydrogen | H | 2999 |
| Nitrogen | N | 545 |
| Oxygen | O | 552 |
| Sulphur | S | 15 |
| Formula | C1947H2999N545O552S15 |
| Total Number of Atoms: | 6058 |
| Total number of positively charged residues (ARG + LYS): | 45 |
| Total number of negatively charged residues (ASP + GLU): | 31 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 71320 Absorption 0.1% (=1 g/l) 1.645, assuming all pairs of CYS residues form cystines Ext. coefficient 70820 Absorption 0.1% (=1 g/l) 1.634, assuming all CYS residues are reduced |
| Aromaticity: | 0.110 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 31.34 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [31.79, 28.21, 16.41] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 80.4872 |
| Grand average of hydropathicity (GRAVY): | -0.20 |