Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4186 |
| Number of amino acids: | 326 |
| Molecular Weight: | 35244.27 Da |
| Theoretical pI: | 4.74 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 28 | 8.59% |
| Cysteine CYS (C) | 9 | 2.76% |
| Glutamic Acid GLU (E) | 19 | 5.83% |
| Aspartic Acid ASP (D) | 22 | 6.75% |
| Glycine GLY (G) | 19 | 5.83% |
| Phynylalanine PHE (F) | 18 | 5.52% |
| Isoleucine ILE (I) | 14 | 4.29% |
| Histidine HIS (H) | 5 | 1.53% |
| Lysine LYS (K) | 9 | 2.76% |
| Methionine MET (M) | 8 | 2.45% |
| Leucine LEU (L) | 28 | 8.59% |
| Asparagine ASN (N) | 20 | 6.13% |
| Glutamine GLN (Q) | 8 | 2.45% |
| Proline PRO (P) | 8 | 2.45% |
| Serine SER (S) | 46 | 14.11% |
| Arginine ARG (R) | 17 | 5.21% |
| Threonine THR (T) | 19 | 5.83% |
| Tryptophan TRP (W) | 1 | 0.31% |
| Valine VAL (V) | 23 | 7.06% |
| Tyrosine TYR (Y) | 5 | 1.53% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1517 |
| Hydrogen | H | 2395 |
| Nitrogen | N | 425 |
| Oxygen | O | 507 |
| Sulphur | S | 17 |
| Formula | C1517H2395N425O507S17 |
| Total Number of Atoms: | 4861 |
| Total number of positively charged residues (ARG + LYS): | 26 |
| Total number of negatively charged residues (ASP + GLU): | 41 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 13450 Absorption 0.1% (=1 g/l) 0.382, assuming all pairs of CYS residues form cystines Ext. coefficient 12950 Absorption 0.1% (=1 g/l) 0.367, assuming all CYS residues are reduced |
| Aromaticity: | 0.074 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 41.79 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [27.30, 28.53, 25.46] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 79.2945 |
| Grand average of hydropathicity (GRAVY): | -0.13 |