Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4183 |
| Number of amino acids: | 303 |
| Molecular Weight: | 33160 Da |
| Theoretical pI: | 6.83 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 36 | 11.88% |
| Cysteine CYS (C) | 6 | 1.98% |
| Glutamic Acid GLU (E) | 15 | 4.95% |
| Aspartic Acid ASP (D) | 17 | 5.61% |
| Glycine GLY (G) | 17 | 5.61% |
| Phynylalanine PHE (F) | 17 | 5.61% |
| Isoleucine ILE (I) | 9 | 2.97% |
| Histidine HIS (H) | 9 | 2.97% |
| Lysine LYS (K) | 16 | 5.28% |
| Methionine MET (M) | 4 | 1.32% |
| Leucine LEU (L) | 29 | 9.57% |
| Asparagine ASN (N) | 6 | 1.98% |
| Glutamine GLN (Q) | 10 | 3.3% |
| Proline PRO (P) | 17 | 5.61% |
| Serine SER (S) | 24 | 7.92% |
| Arginine ARG (R) | 15 | 4.95% |
| Threonine THR (T) | 14 | 4.62% |
| Tryptophan TRP (W) | 4 | 1.32% |
| Valine VAL (V) | 30 | 9.9% |
| Tyrosine TYR (Y) | 8 | 2.64% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1497 |
| Hydrogen | H | 2330 |
| Nitrogen | N | 402 |
| Oxygen | O | 430 |
| Sulphur | S | 10 |
| Formula | C1497H2330N402O430S10 |
| Total Number of Atoms: | 4669 |
| Total number of positively charged residues (ARG + LYS): | 31 |
| Total number of negatively charged residues (ASP + GLU): | 32 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 34295 Absorption 0.1% (=1 g/l) 1.034, assuming all pairs of CYS residues form cystines Ext. coefficient 33920 Absorption 0.1% (=1 g/l) 1.023, assuming all CYS residues are reduced |
| Aromaticity: | 0.096 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 36.69 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [32.01, 21.12, 27.72] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 89.505 |
| Grand average of hydropathicity (GRAVY): | 0.03 |