Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4182 |
| Number of amino acids: | 501 |
| Molecular Weight: | 54540.89 Da |
| Theoretical pI: | 8.07 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 58 | 11.58% |
| Cysteine CYS (C) | 8 | 1.6% |
| Glutamic Acid GLU (E) | 17 | 3.39% |
| Aspartic Acid ASP (D) | 27 | 5.39% |
| Glycine GLY (G) | 41 | 8.18% |
| Phynylalanine PHE (F) | 22 | 4.39% |
| Isoleucine ILE (I) | 17 | 3.39% |
| Histidine HIS (H) | 10 | 2% |
| Lysine LYS (K) | 23 | 4.59% |
| Methionine MET (M) | 12 | 2.4% |
| Leucine LEU (L) | 46 | 9.18% |
| Asparagine ASN (N) | 24 | 4.79% |
| Glutamine GLN (Q) | 21 | 4.19% |
| Proline PRO (P) | 33 | 6.59% |
| Serine SER (S) | 34 | 6.79% |
| Arginine ARG (R) | 23 | 4.59% |
| Threonine THR (T) | 30 | 5.99% |
| Tryptophan TRP (W) | 9 | 1.8% |
| Valine VAL (V) | 27 | 5.39% |
| Tyrosine TYR (Y) | 19 | 3.79% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 2438 |
| Hydrogen | H | 3757 |
| Nitrogen | N | 667 |
| Oxygen | O | 718 |
| Sulphur | S | 20 |
| Formula | C2438H3757N667O718S20 |
| Total Number of Atoms: | 7600 |
| Total number of positively charged residues (ARG + LYS): | 46 |
| Total number of negatively charged residues (ASP + GLU): | 44 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 78310 Absorption 0.1% (=1 g/l) 1.436, assuming all pairs of CYS residues form cystines Ext. coefficient 77810 Absorption 0.1% (=1 g/l) 1.427, assuming all CYS residues are reduced |
| Aromaticity: | 0.100 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 35.05 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [27.94, 26.35, 26.55] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 76.2475 |
| Grand average of hydropathicity (GRAVY): | -0.23 |