Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4180 |
| Number of amino acids: | 913 |
| Molecular Weight: | 102117.09 Da |
| Theoretical pI: | 6.61 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 58 | 6.35% |
| Cysteine CYS (C) | 6 | 0.66% |
| Glutamic Acid GLU (E) | 35 | 3.83% |
| Aspartic Acid ASP (D) | 49 | 5.37% |
| Glycine GLY (G) | 68 | 7.45% |
| Phynylalanine PHE (F) | 46 | 5.04% |
| Isoleucine ILE (I) | 55 | 6.02% |
| Histidine HIS (H) | 25 | 2.74% |
| Lysine LYS (K) | 30 | 3.29% |
| Methionine MET (M) | 24 | 2.63% |
| Leucine LEU (L) | 80 | 8.76% |
| Asparagine ASN (N) | 45 | 4.93% |
| Glutamine GLN (Q) | 31 | 3.4% |
| Proline PRO (P) | 65 | 7.12% |
| Serine SER (S) | 69 | 7.56% |
| Arginine ARG (R) | 49 | 5.37% |
| Threonine THR (T) | 65 | 7.12% |
| Tryptophan TRP (W) | 15 | 1.64% |
| Valine VAL (V) | 56 | 6.13% |
| Tyrosine TYR (Y) | 42 | 4.6% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 4617 |
| Hydrogen | H | 7059 |
| Nitrogen | N | 1231 |
| Oxygen | O | 1334 |
| Sulphur | S | 30 |
| Formula | C4617H7059N1231O1334S30 |
| Total Number of Atoms: | 14271 |
| Total number of positively charged residues (ARG + LYS): | 79 |
| Total number of negatively charged residues (ASP + GLU): | 84 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 145455 Absorption 0.1% (=1 g/l) 1.424, assuming all pairs of CYS residues form cystines Ext. coefficient 145080 Absorption 0.1% (=1 g/l) 1.421, assuming all CYS residues are reduced |
| Aromaticity: | 0.113 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 40.45 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [32.20, 27.05, 21.58] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 81.8072 |
| Grand average of hydropathicity (GRAVY): | -0.22 |