Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4177 |
| Number of amino acids: | 757 |
| Molecular Weight: | 82602.29 Da |
| Theoretical pI: | 7.61 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 45 | 5.94% |
| Cysteine CYS (C) | 13 | 1.72% |
| Glutamic Acid GLU (E) | 40 | 5.28% |
| Aspartic Acid ASP (D) | 33 | 4.36% |
| Glycine GLY (G) | 42 | 5.55% |
| Phynylalanine PHE (F) | 34 | 4.49% |
| Isoleucine ILE (I) | 40 | 5.28% |
| Histidine HIS (H) | 9 | 1.19% |
| Lysine LYS (K) | 44 | 5.81% |
| Methionine MET (M) | 6 | 0.79% |
| Leucine LEU (L) | 100 | 13.21% |
| Asparagine ASN (N) | 48 | 6.34% |
| Glutamine GLN (Q) | 22 | 2.91% |
| Proline PRO (P) | 46 | 6.08% |
| Serine SER (S) | 86 | 11.36% |
| Arginine ARG (R) | 30 | 3.96% |
| Threonine THR (T) | 57 | 7.53% |
| Tryptophan TRP (W) | 5 | 0.66% |
| Valine VAL (V) | 43 | 5.68% |
| Tyrosine TYR (Y) | 14 | 1.85% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 3678 |
| Hydrogen | H | 5892 |
| Nitrogen | N | 984 |
| Oxygen | O | 1131 |
| Sulphur | S | 19 |
| Formula | C3678H5892N984O1131S19 |
| Total Number of Atoms: | 11704 |
| Total number of positively charged residues (ARG + LYS): | 74 |
| Total number of negatively charged residues (ASP + GLU): | 73 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 49110 Absorption 0.1% (=1 g/l) 0.595, assuming all pairs of CYS residues form cystines Ext. coefficient 48360 Absorption 0.1% (=1 g/l) 0.585, assuming all CYS residues are reduced |
| Aromaticity: | 0.070 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 37.85 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [31.18, 29.33, 25.23] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 94.5441 |
| Grand average of hydropathicity (GRAVY): | -0.13 |